ПЕРЕДБАЧЕННЯ ФОРМИ БІОГЕННИХ МАГНІТНИХ НАНОЧАСТИНОК У МАГНІТОТАКСИСНИХ БАКТЕРІЯХ ЗА ДОПОМОГОЮ ДЕРЕВ РІШЕНЬ ТА ВИПАДКОВИХ ЛІСІВ
Ключові слова:
biogenic magnetic nanoparticles, magnetogenetics, decision tree classifier, random forest classifierАнотація
Predicting biogenic magnetic nanoparticle shape is crucial for magnetogenetics. This study explores machine learning, specifically Decision Trees and Random Forests, for efficient shape classification of magnetosome crystals. Cross-validation demonstrates high accuracy, suggesting machine learning's potential for rapid shape prediction in bio-magnetic applications.
Посилання
Magnetogenetics: remote activation of cellular functions triggered by magnetic switches / S. Del Sol-Fernández et al. Nanoscale. 2022. Vol. 14, no. 6. P. 2091–2118. https://doi.org/10.1039/d1nr06303k
Blakemore R. Magnetotactic bacteria. Science. 1975. Vol. 190, no. 4212. P. 377–379. https://doi.org/10.1126/science.170679
Effects of Static and Low‐Frequency Magnetic Fields on Gene Expression / V. Zablotskii et al. Journal of Magnetic Resonance Imaging. 2025. https://doi.org/10.1002/jmri.29726
Bencardino D. A., Zaitsev M. Commentary on the “Effects of Static and Low‐Frequency Magnetic Fields on Gene Expression”. Journal of Magnetic Resonance Imaging. 2025. https://doi.org/10.1002/jmri.29765
Liu P., Zheng Y., Zhang R., Bai J., Zhu K., Benzerara K., Menguy N., Zhao X., Roberts A. P., Pan Y., Li J. Key gene networks that control magnetosome biomineralization in magnetotactic bacteria. National Science Review. 2023. Vol. 10. No. 1. https://doi.org/10.1093/nsr/nwac238
Diversity of Magneto-Aerotactic Behaviors and Oxygen Sensing Mechanisms in Cultured Magnetotactic Bacteria / C. T. Lefèvre et al. Biophysical Journal. 2014. Vol. 107, no. 2. P. 527–538. https://doi.org/10.1016/j.bpj.2014.05.043